STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010712Collagen alpha-4(IV) chain-like. (1464 aa)    
Predicted Functional Partners:
itga3
Integrin alpha 3.
    
 0.720
LOC107557321
Integrin alpha-3-like.
    
 0.720
LOC107601250
Integrin alpha-3-like isoform X1.
    
 0.710
ENSSGRP00000007795
Integrin beta-3-like.
    
 0.705
itgb3
Integrin beta 3.
    
 0.705
ENSSGRP00000049999
Integrin beta-4-like.
   
 0.705
ENSSGRP00000057916
Integrin beta-4-like.
   
 0.705
itgb5
Integrin beta-5 isoform X1.
    
 0.705
ENSSGRP00000087283
Integrin beta-3-like.
    
 0.705
ENSSGRP00000110622
Integrin beta-5-like.
    
 0.705
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.