STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107590562Sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like isoform X1. (1066 aa)    
Predicted Functional Partners:
LOC107577258
Cardiac phospholamban-like.
   
 0.966
PLN
Cardiac phospholamban-like.
   
 0.966
ENSSGRP00000056527
Ryanodine receptor 1-like.
   
 
 0.694
ENSSGRP00000076213
LOW QUALITY PROTEIN: ryanodine receptor 2-like.
   
 
 0.679
ENSSGRP00000060674
Si:ch211-270g19.5.
   
 0.677
ENSSGRP00000071166
Si:ch211-270g19.5.
   
 0.677
ENSSGRP00000051775
ATPase plasma membrane Ca2+ transporting 3b.
  
 
0.604
ENSSGRP00000100507
Plasma membrane calcium-transporting ATPase 1-like.
  
 
0.603
ENSSGRP00000011491
annotation not available
  
 
0.601
LOC107603076
Plasma membrane calcium-transporting ATPase 3-like isoform X1.
  
 
0.600
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.