STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592202Tetraspanin-12-like. (301 aa)    
Predicted Functional Partners:
LOC107595887
Norrin-like.
    
 0.659
ENSSGRP00000102603
Norrin cystine knot growth factor NDP.
    
 0.659
LOC107600811
Frizzled-4-like.
   
 
 0.655
ENSSGRP00000104720
annotation not available
   
 
 0.655
LOC107554901
Leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1.
      
 0.624
ENSSGRP00000068297
Danio rerio leucine-rich repeat containing G protein-coupled receptor 4 (lgr4), mRNA.
      
 0.624
znf408
Zinc finger protein 408 isoform X1.
      
 0.614
ENSSGRP00000103299
Zinc finger protein 761-like.
      
 0.614
ENSSGRP00000012084
annotation not available
     
 0.494
LOC107583137
Low-density lipoprotein receptor-related protein 5-like.
     
 0.494
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.