Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
kcnd2Potassium voltage-gated channel Shal-related subfamily D member 2. (624 aa)    
Predicted Functional Partners:
FAU
Small subunit ribosomal protein S30e.
   
  0.801
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
  0.801
LOC107567395
Small subunit ribosomal protein S30e.
   
  0.801
LOC107555153
Small subunit ribosomal protein S30e.
   
  0.801
ENSSGRP00000003030
annotation not available
    
 0.737
ENSSGRP00000005942
annotation not available
    
 0.737
ENSSGRP00000018077
Kv channel interacting protein 2.
    
 0.737
ENSSGRP00000023524
Si:ch211-145b13.5.
    
 0.737
ENSSGRP00000034625
Calsenilin-like.
    
 0.737
KCNIP4
Kv channel-interacting protein 4-like.
    
 0.737
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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