STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010784annotation not available (227 aa)    
Predicted Functional Partners:
LOC107562460
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
    
 0.788
LOC107560905
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
    
 0.788
Pdcd11
RRNA biogenesis protein RRP5.
  
    0.706
ENSSGRP00000006306
TRNA methyltransferase 10 homolog A-like.
   
 0.599
ENSSGRP00000027991
tRNA methyltransferase 10B.
   
 0.599
ENSSGRP00000079080
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.599
ENSSGRP00000083647
tRNA methyltransferase 10A.
   
 0.599
ENSSGRP00000086134
TRNA methyltransferase 10 homolog B-like.
   
 0.599
ENSSGRP00000102015
Mitochondrial ribonuclease P protein 1-like.
   
 0.599
LOC107577408
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
  
  
 0.581
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.