STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107553222Estrogen receptor beta-2. (668 aa)    
Predicted Functional Partners:
med1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
    
 0.857
LOC107563516
Progesterone receptor-like.
   
0.840
ENSSGRP00000079391
Progesterone receptor-like.
   
0.840
SP1
Transcription factor Sp1-like isoform X1.
    
 0.814
ENSSGRP00000035477
Transcription factor Sp1-like.
    
 0.814
ENSSGRP00000032236
Histone acetyltransferase p300-like.
    
 0.787
ENSSGRP00000072866
E1A binding protein p300 a.
    
 0.787
ENSSGRP00000105360
Histone acetyltransferase p300-like.
    
 0.787
ENSSGRP00000108839
Histone acetyltransferase p300-like.
    
 0.787
LOC107596035
Nuclear receptor coactivator 2.
    
 0.733
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.