Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010808Beta-1,3-galactosyltransferase 1-like. (210 aa)    
Predicted Functional Partners:
LOC107592109
Beta-1,4-galactosyltransferase 3-like isoform X1.
   
 
 0.860
ENSSGRP00000017468
Beta-1,4-galactosyltransferase 4-like.
   
 
 0.860
LOC107593408
Beta-1,4-galactosyltransferase 3-like isoform X1.
   
 
 0.860
ENSSGRP00000035269
Si:dkey-199f5.8.
   
 
 0.860
LOC107599894
Beta-1,4-galactosyltransferase 2-like.
   
 
 0.860
ENSSGRP00000052215
Beta-1,4-galactosyltransferase 3-like.
   
 
 0.860
LOC107557142
Beta-1,4-galactosyltransferase 2-like.
   
 
 0.860
b4galt4
Beta-1,4-galactosyltransferase 4.
   
 
 0.860
ENSSGRP00000029301
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1.
     
  0.851
St3gal4
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1.
     
  0.851
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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