STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010817Coiled-coil domain containing 9. (337 aa)    
Predicted Functional Partners:
znf593
Bud site selection protein 20.
   
 
 0.578
LOC107566553
Protein phosphatase 1 regulatory subunit 35-like.
      
 0.562
eif4a3
Eukaryotic initiation factor 4A-III.
   
 0.519
LOC107596045
Testis-expressed sequence 10 protein homolog.
   
 0.504
LOC107593696
Testis-expressed sequence 10 protein homolog.
   
 0.504
LOC107574095
HLA class II histocompatibility antigen, DP alpha 1 chain-like.
   
 0.494
ENSSGRP00000006451
WD repeat-containing protein 18-like.
   
 0.475
LOC107593126
Pre-rRNA-processing protein IPI3.
   
 0.475
ENSSGRP00000085358
WD repeat domain 18.
   
 0.475
ENSSGRP00000032011
annotation not available
   
  0.444
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.