Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107576843Zona pellucida-like domain-containing protein 1. (411 aa)    
Predicted Functional Partners:
bricd5
BRICHOS domain-containing protein 5 isoform X1.
      
 0.695
LOC107557939
Cerebellin-1-like.
      
 0.603
ENSSGRP00000083603
Cerebellin-1-like.
      
 0.603
ENSSGRP00000003088
annotation not available
      
 0.580
ENSSGRP00000028270
Lipoxygenase homology domains 1b.
      
 0.580
LOC107568513
Calcium-binding protein 1/2/4/5.
      
 0.573
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
    
 
 0.566
prkcsh
Protein kinase C substrate 80K-H.
    
 
 0.566
LOC107601372
Anterior gradient protein 3-like.
      
 0.554
LOC107560612
Anterior gradient protein 3-like.
      
 0.554
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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