Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010843Uncharacterized protein LOC107594450. (323 aa)    
Predicted Functional Partners:
znf367
Zinc finger protein 367.
    
 0.722
ENSSGRP00000023805
28S ribosomal protein S28, mitochondrial-like.
   
  
 0.652
ENSSGRP00000037084
Mitochondrial ribosomal protein S28.
   
  
 0.652
ENSSGRP00000047189
Coiled-coil domain containing 77.
      
 0.646
ENSSGRP00000093493
Coiled-coil domain containing 77.
      
 0.646
ccdc34
Coiled-coil domain-containing protein 34.
    
 
 0.644
ENSSGRP00000006961
Nuclear envelope integral membrane protein 1-like.
      
 0.643
LOC107549035
Nuclear envelope integral membrane protein 1-like isoform X1.
      
 0.643
LOC107584423
Selenocysteine-specific elongation factor-like.
   
 
 0.626
LOC107568193
Selenocysteine-specific elongation factor-like.
   
 
 0.626
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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