Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010849Nephronectin a. (602 aa)    
Predicted Functional Partners:
ENSSGRP00000037328
Fras1 related extracellular matrix 1a.
    
 0.980
ENSSGRP00000054999
LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1-like.
    
 0.980
Itga8
Integrin alpha 8.
     
 0.966
ENSSGRP00000101813
Integrin alpha-8-like.
     
 0.966
npnt
Nephronectin isoform X1.
    
  0.944
ENSSGRP00000039292
Extracellular matrix protein FRAS1-like.
   
 0.939
ENSSGRP00000081994
Extracellular matrix protein FRAS1-like.
   
 0.939
ENSSGRP00000041858
Integrin alpha-8-like.
     
 0.919
ENSSGRP00000095300
annotation not available
     
 0.919
ENSSGRP00000030094
FRAS1-related extracellular matrix protein 2-like.
    
  0.914
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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