STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010868Caspase-8-like. (240 aa)    
Predicted Functional Partners:
LOC107559437
FAS-associated death domain protein-like.
   
 0.953
LOC107593914
Caspase-9-like isoform X1.
   
0.944
casp9
Caspase-9 isoform X1.
   
0.944
LOC107591725
Actin, cytoplasmic 1.
    
 0.910
LOC107590707
Actin, cytoplasmic 1.
    
 0.910
LOC107595882
Granzyme B-like.
    
  0.902
ENSSGRP00000105500
Granzyme F-like.
    
  0.902
LOC107570004
Granzyme B(G,H)-like.
    
  0.902
ENSSGRP00000029960
Receptor-interacting serine-threonine kinase 3.
   
 0.865
ENSSGRP00000059563
Receptor-interacting serine-threonine kinase 3.
   
 0.865
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.