Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010892Von Willebrand factor D and EGF domain-containing protein-like. (192 aa)    
Predicted Functional Partners:
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
    
 0.500
ENSSGRP00000018679
annotation not available
    
 0.477
LOC107601518
Tetratricopeptide repeat protein 9C-like.
    
 0.476
ttc9c
Tetratricopeptide repeat protein 9C.
    
 0.476
LOC107582914
Cell division cycle protein 27 homolog.
    
 0.470
ENSSGRP00000102567
Cell division cycle protein 27 homolog.
    
 0.470
cdc40
Cell division cycle 40.
    
 0.468
ENSSGRP00000013227
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.468
ENSSGRP00000011618
AT-rich interactive domain-containing protein 4A-like.
   
 0.446
ENSSGRP00000061731
AT rich interactive domain 4A (RBP1-like).
   
 0.446
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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