Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107590566Protein yippee-like 3. (119 aa)    
Predicted Functional Partners:
LOC107598169
Armadillo repeat-containing protein 8.
    
 0.757
ENSSGRP00000112485
Armadillo repeat containing 8.
    
 0.757
LOC107567075
Seizure protein 6 homolog isoform X1.
      
 0.747
ENSSGRP00000019121
WD repeat-containing protein 26-like.
   
 
 0.675
LOC107598934
WD repeat-containing protein 26-like.
   
 
 0.675
ENSSGRP00000088810
WD repeat domain 26b.
   
 
 0.675
ENSSGRP00000108600
WD repeat domain 26b.
   
 
 0.675
LOC107567185
Double C2-like domain-containing protein alpha.
   
  
 0.665
LOC107552479
Double C2-like domain-containing protein alpha.
   
  
 0.665
LOC107568490
Aspartate beta-hydroxylase domain-containing protein 2-like isoform X1.
      
 0.660
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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