Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000010930Mast/stem cell growth factor receptor Kit-like. (642 aa)    
Predicted Functional Partners:
LOC107572933
Kit ligand-like.
   
 0.986
LOC107574894
Kit ligand-like.
   
 0.986
ENSSGRP00000091896
Colony stimulating factor 1a (macrophage).
   
 0.956
LOC107556909
Macrophage colony-stimulating factor 1.
   
 0.956
ENSSGRP00000053317
Kit ligand b.
     
 0.953
LOC107580747
Uncharacterized protein LOC107580747 isoform X1.
     
 0.953
il34
Interleukin 34.
   
 0.944
ENSSGRP00000059246
Interleukin 34.
   
 0.944
LOC107562835
GTPase HRas-like isoform X1.
    
 0.923
ENSSGRP00000082889
Colony stimulating factor 1b (macrophage).
  
 0.920
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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