Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107559708Casein kinase II subunit alpha-like isoform X1. (382 aa)    
Predicted Functional Partners:
LOC107584313
Casein kinase II subunit beta.
   
 0.976
LOC107584313-2
Casein kinase II subunit beta.
   
 0.976
LOC107574555
FACT complex subunit SPT16-like.
   
 0.881
LOC107572031
Casein kinase II subunit alpha.
  
  
 
0.878
LOC107589174
Casein kinase II subunit alpha'-like.
  
  
 
0.878
LOC107559372
Segment polarity protein dishevelled homolog DVL-3-like.
    
 0.859
ENSSGRP00000088800
Dishevelled segment polarity protein 3b.
    
 0.859
LOC107575491
Segment polarity protein dishevelled homolog DVL-3-like.
    
 0.859
ENSSGRP00000108486
Segment polarity protein dishevelled homolog DVL-3-like.
    
 0.859
LOC107564810
FUN14 domain-containing protein 1-like isoform X1.
   
 0.837
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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