Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010953Exosome complex component RRP41-like. (245 aa)    
Predicted Functional Partners:
ENSSGRP00000002799
Exosome complex component RRP42-like.
  
 0.999
exosc7
Exosome complex component RRP42.
  
 0.999
ENSSGRP00000013485
annotation not available
  
 0.999
exosc9
Exosome complex component RRP45.
   
 0.999
exosc5
Exosome complex component RRP46.
   
0.999
ENSSGRP00000045755
Exosome complex component RRP43-like.
   
 0.999
ENSSGRP00000049016
Exosome component 1.
   
 0.999
LOC107589088
Exosome complex component RRP43-like.
  
 0.999
EXOSC3
Exosome complex component RRP40.
  
 0.999
LOC107594272
Exosome complex component CSL4-like.
   
 0.999
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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