STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107552722Tropomyosin alpha-1 chain-like isoform X1. (289 aa)    
Predicted Functional Partners:
LOC107549542
Actin, alpha cardiac muscle 1.
   
 0.959
LOC107549100
Actin, alpha cardiac muscle.
   
 0.959
LOC107589168
Actin, alpha cardiac muscle 1-like.
   
 0.959
ENSSGRP00000004999
Troponin T, cardiac muscle isoforms-like.
   
 0.892
ENSSGRP00000005763
Troponin T, cardiac muscle-like.
   
 0.892
ENSSGRP00000006623
Troponin T, cardiac muscle isoforms-like.
   
 0.892
LOC107560724
Troponin T, cardiac muscle-like isoform X1.
   
 0.892
LOC107555938
Myosin light chain 1, skeletal muscle isoform-like.
   
 0.865
LOC107596080
Myosin light chain 1, skeletal muscle isoform-like.
   
 0.865
LOC107574207
KxDL motif-containing protein 1.
   
   0.747
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.