STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573484Torsin-4A. (390 aa)    
Predicted Functional Partners:
spart
Spartin isoform X1.
      
 0.625
LOC107589327
COP9 signalosome complex subunit 2.
   
 
  0.567
COPS6
COP9 signalosome complex subunit 6.
   
 
  0.524
LOC107558694
COP9 signalosome complex subunit 4 isoform X1.
   
  0.516
ENSSGRP00000021110
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
  0.516
ENSSGRP00000044808
Sulfatase modifying factor 1.
      
 0.499
LOC107585117
Sulfatase-modifying factor 1-like isoform X1.
      
 0.499
Ston1
Stonin-1/2.
    
  0.473
LOC107583485
Stonin-2-like isoform X1.
    
  0.473
LOC107588275
Stonin-2-like isoform X1.
    
  0.473
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.