Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011010annotation not available (105 aa)    
Predicted Functional Partners:
ENSSGRP00000025245
annotation not available
    
  0.540
ENSSGRP00000043483
Collectin sub-family member 12.
    
  0.514
ENSSGRP00000001871
Tenascin C.
   
  0.491
ENSSGRP00000009821
Zmp:0000000846.
   
  0.491
ENSSGRP00000010979
Tenascin C.
   
  0.491
tnr
Tenascin-R isoform X1.
   
  0.491
LOC107558359
tenascin-R-like.
   
  0.491
ENSSGRP00000089868
Zmp:0000000846.
   
  0.491
ENSSGRP00000007359
annotation not available
    
  0.488
ENSSGRP00000012771
Fibroleukin-like isoform X1.
    
  0.488
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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