Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011019Zgc:158328. (1318 aa)    
Predicted Functional Partners:
LOC107602469
WD repeat-containing protein WRAP73-like isoform X1.
    
 
 0.636
LOC107595759
WD repeat-containing protein WRAP73-like.
    
 
 0.636
LOC107563389
Transcription factor AP-1-like isoform X1.
    
 0.633
ENSSGRP00000015112
Macrophage stimulating 1 receptor b.
    
 0.624
ENSSGRP00000088491
Macrophage-stimulating protein receptor-like.
    
 0.624
ENSSGRP00000013338
Si:ch211-113g11.6.
     
 0.606
LOC107597982
Semaphorin-7A-like.
     
 0.606
Ubox5
U-box domain-containing protein 5.
      
 0.604
LOC107554323
E3 ubiquitin-protein ligase listerin-like.
      
 0.597
ltn1
E3 ubiquitin-protein ligase listerin isoform X1.
      
 0.597
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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