ENSSGRP00000011152 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000011152

Tyrosine-protein phosphatase non-receptor type 23-like. (1870 aa)

Predicted Functional Partners:

LOC107560257

0.956

LOC107589974

0.956

ENSSGRP00000002322

0.906

LOC107555917

0.882

LOC107596068

0.882

ENSSGRP00000002525

0.866

ENSSGRP00000053437

0.866

LOC107556673

0.855

stam

0.855

ENSSGRP00000024684

0.840

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002322	ENSSGRP00000002525	ENSSGRP00000002322	ENSSGRP00000002525	annotation not available	Magnesium-dependent phosphatase 1-like.	0.678
ENSSGRP00000002322	ENSSGRP00000011152	ENSSGRP00000002322	ENSSGRP00000011152	annotation not available	Tyrosine-protein phosphatase non-receptor type 23-like.	0.906
ENSSGRP00000002322	ENSSGRP00000024684	ENSSGRP00000002322	ENSSGRP00000024684	annotation not available	LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate-like.	0.954
ENSSGRP00000002322	ENSSGRP00000053437	ENSSGRP00000002322	ENSSGRP00000053437	annotation not available	annotation not available	0.678
ENSSGRP00000002322	LOC107555917	ENSSGRP00000002322	ENSSGRP00000013935	annotation not available	Signal transducing adapter molecule 2-like.	0.931
ENSSGRP00000002322	LOC107556673	ENSSGRP00000002322	ENSSGRP00000044461	annotation not available	Signal transducing adapter molecule 1-like.	0.975
ENSSGRP00000002322	LOC107560257	ENSSGRP00000002322	ENSSGRP00000020822	annotation not available	Transmembrane 9 superfamily member 1-like.	0.468
ENSSGRP00000002322	LOC107589974	ENSSGRP00000002322	ENSSGRP00000109629	annotation not available	Transmembrane 9 superfamily member 1-like.	0.468
ENSSGRP00000002322	LOC107596068	ENSSGRP00000002322	ENSSGRP00000021279	annotation not available	Signal transducing adapter molecule 2-like.	0.931
ENSSGRP00000002322	stam	ENSSGRP00000002322	ENSSGRP00000067604	annotation not available	Signal transducing adapter molecule 1.	0.975
ENSSGRP00000002525	ENSSGRP00000002322	ENSSGRP00000002525	ENSSGRP00000002322	Magnesium-dependent phosphatase 1-like.	annotation not available	0.678
ENSSGRP00000002525	ENSSGRP00000011152	ENSSGRP00000002525	ENSSGRP00000011152	Magnesium-dependent phosphatase 1-like.	Tyrosine-protein phosphatase non-receptor type 23-like.	0.866
ENSSGRP00000002525	LOC107560257	ENSSGRP00000002525	ENSSGRP00000020822	Magnesium-dependent phosphatase 1-like.	Transmembrane 9 superfamily member 1-like.	0.585
ENSSGRP00000002525	LOC107589974	ENSSGRP00000002525	ENSSGRP00000109629	Magnesium-dependent phosphatase 1-like.	Transmembrane 9 superfamily member 1-like.	0.585
ENSSGRP00000011152	ENSSGRP00000002322	ENSSGRP00000011152	ENSSGRP00000002322	Tyrosine-protein phosphatase non-receptor type 23-like.	annotation not available	0.906
ENSSGRP00000011152	ENSSGRP00000002525	ENSSGRP00000011152	ENSSGRP00000002525	Tyrosine-protein phosphatase non-receptor type 23-like.	Magnesium-dependent phosphatase 1-like.	0.866
ENSSGRP00000011152	ENSSGRP00000024684	ENSSGRP00000011152	ENSSGRP00000024684	Tyrosine-protein phosphatase non-receptor type 23-like.	LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate-like.	0.840
ENSSGRP00000011152	ENSSGRP00000053437	ENSSGRP00000011152	ENSSGRP00000053437	Tyrosine-protein phosphatase non-receptor type 23-like.	annotation not available	0.866
ENSSGRP00000011152	LOC107555917	ENSSGRP00000011152	ENSSGRP00000013935	Tyrosine-protein phosphatase non-receptor type 23-like.	Signal transducing adapter molecule 2-like.	0.882
ENSSGRP00000011152	LOC107556673	ENSSGRP00000011152	ENSSGRP00000044461	Tyrosine-protein phosphatase non-receptor type 23-like.	Signal transducing adapter molecule 1-like.	0.855