STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011166Regulator of nonsense transcripts 3B-like. (119 aa)    
Predicted Functional Partners:
ENSSGRP00000007313
Regulator of nonsense transcripts 1-like.
    
 0.990
LOC107585897
Protein mago nashi homolog.
    
 0.990
LOC107549138
Protein mago nashi homolog.
    
 0.990
upf1
Regulator of nonsense transcripts 1 isoform X1.
    
 0.990
eif4a3
Eukaryotic initiation factor 4A-III.
   
 0.971
LOC107559416
Nuclear RNA export factor 1-like isoform X1.
    
 0.966
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
   
 0.966
ENSSGRP00000099627
annotation not available
   
 0.966
LOC107548230
Nuclear RNA export factor 1-like isoform X1.
    
 0.966
ENSSGRP00000003666
SMG5 nonsense mediated mRNA decay factor.
   
 0.940
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.