STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011170GATA-binding factor 6-B-like isoform X1. (175 aa)    
Predicted Functional Partners:
LOC107567477
Homeobox protein Nkx-2.5-like.
   
 0.879
LOC107598375
Homeobox protein Nkx-2.5-like.
   
 0.879
Lmcd1
LIM and cysteine-rich domains protein 1.
    
 0.800
LOC107592441
Zinc finger protein ZFPM2-like.
    
 0.756
LOC107556951
Zinc finger protein ZFPM2-like.
    
 0.756
LOC107554475
Rhombotin-2.
    
 0.722
LOC107554555
Rhombotin-2-like.
    
 0.722
zfpm1
Zinc finger protein ZFPM1.
   
 0.706
ENSSGRP00000062805
Zinc finger protein ZFPM1-like.
   
 0.706
foxa2
Forkhead box protein A2, hepatocyte nuclear factor 3-beta.
    
 0.698
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.