Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107578401Kelch-like protein 33. (451 aa)    
Predicted Functional Partners:
ENSSGRP00000005442
RING-box protein 1.
    
 0.683
rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.683
LOC107597410
Rabankyrin-5-like.
     
 0.677
LOC107587818
T-complex protein 1 subunit gamma.
    
   0.615
LOC107597996
T-complex protein 1 subunit gamma-like.
    
   0.615
cct5
T-complex protein 1 subunit epsilon.
    
   0.587
LOC107549193
T-complex protein 1 subunit epsilon-like.
    
   0.587
ENSSGRP00000037830
Coiled-coil domain-containing protein 24-like.
      
 0.580
ENSSGRP00000060935
annotation not available
      
 0.580
cct8
T-complex protein 1 subunit theta isoform X1.
    
   0.579
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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