STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011180annotation not available (143 aa)    
Predicted Functional Partners:
LOC107567355
Solute carrier family 25 member 47-B-like.
      
 0.493
LOC107596687
Extracellular matrix protein 1-like.
      
 0.456
ENSSGRP00000066206
Extracellular matrix protein 1b.
      
 0.456
ddx52
Probable ATP-dependent RNA helicase DDX52 isoform X1.
      
 0.451
ENSSGRP00000108987
Probable ATP-dependent RNA helicase DDX52.
      
 0.451
LOC107568725
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 7.
   
 
 0.409
ENSSGRP00000002490
annotation not available
    
 
 0.407
Slc39a13
Solute carrier family 39 (zinc transporter), member 13.
    
 
 0.407
ENSSGRP00000068313
Solute carrier family 39 (zinc transporter), member 13.
    
 
 0.407
ENSSGRP00000006386
annotation not available
    
 0.404
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (54%) [HD]