Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107558842Claudin-8-like. (293 aa)    
Predicted Functional Partners:
cldn12
Claudin-12.
     
 0.903
LOC107548994
Occludin-like.
   
 0.861
ENSSGRP00000100585
Occludin a.
   
 0.861
ENSSGRP00000105955
Claudin 12.
     
 0.855
ENSSGRP00000089016
Claudin-10-like.
     
 0.837
LOC107592677
Tight junction protein ZO-2-like.
   
 0.830
ENSSGRP00000107833
Tight junction protein 3.
   
 0.830
ENSSGRP00000032737
Claudin-23-like.
   
 
 0.823
ENSSGRP00000091729
Claudin-23-like.
   
 
 0.823
ENSSGRP00000103554
Claudin-18-like.
     
 0.823
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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