ENSSGRP00000011197 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000001041	ENSSGRP00000011197	ENSSGRP00000001041	ENSSGRP00000011197	GULP PTB domain containing engulfment adaptor 1b.	annotation not available	0.871
ENSSGRP00000001041	ENSSGRP00000066801	ENSSGRP00000001041	ENSSGRP00000066801	GULP PTB domain containing engulfment adaptor 1b.	PTB domain-containing engulfment adapter protein 1-like.	0.817
ENSSGRP00000001041	LOC107554205	ENSSGRP00000001041	ENSSGRP00000090255	GULP PTB domain containing engulfment adaptor 1b.	PTB domain-containing engulfment adapter protein 1-like.	0.817
ENSSGRP00000011197	ENSSGRP00000001041	ENSSGRP00000011197	ENSSGRP00000001041	annotation not available	GULP PTB domain containing engulfment adaptor 1b.	0.871
ENSSGRP00000011197	ENSSGRP00000066801	ENSSGRP00000011197	ENSSGRP00000066801	annotation not available	PTB domain-containing engulfment adapter protein 1-like.	0.661
ENSSGRP00000011197	ENSSGRP00000097515	ENSSGRP00000011197	ENSSGRP00000097515	annotation not available	annotation not available	0.767
ENSSGRP00000011197	LOC107549238	ENSSGRP00000011197	ENSSGRP00000076655	annotation not available	G patch domain-containing protein 4-like.	0.650
ENSSGRP00000011197	LOC107551611	ENSSGRP00000011197	ENSSGRP00000026931	annotation not available	Complement C1q subcomponent subunit B-like isoform X1.	0.761
ENSSGRP00000011197	LOC107554205	ENSSGRP00000011197	ENSSGRP00000090255	annotation not available	PTB domain-containing engulfment adapter protein 1-like.	0.661
ENSSGRP00000011197	LOC107562715	ENSSGRP00000011197	ENSSGRP00000072563	annotation not available	PTB domain-containing engulfment adapter protein 1-like isoform X1.	0.871
ENSSGRP00000011197	LOC107584160	ENSSGRP00000011197	ENSSGRP00000028546	annotation not available	PTB domain-containing engulfment adapter protein 1 isoform X1.	0.871
ENSSGRP00000011197	LOC107597973	ENSSGRP00000011197	ENSSGRP00000090752	annotation not available	G patch domain-containing protein 4-like.	0.650
ENSSGRP00000011197	Lrrc71	ENSSGRP00000011197	ENSSGRP00000110563	annotation not available	Leucine-rich repeat-containing protein 71.	0.652
ENSSGRP00000066801	ENSSGRP00000001041	ENSSGRP00000066801	ENSSGRP00000001041	PTB domain-containing engulfment adapter protein 1-like.	GULP PTB domain containing engulfment adaptor 1b.	0.817
ENSSGRP00000066801	ENSSGRP00000011197	ENSSGRP00000066801	ENSSGRP00000011197	PTB domain-containing engulfment adapter protein 1-like.	annotation not available	0.661
ENSSGRP00000066801	LOC107562715	ENSSGRP00000066801	ENSSGRP00000072563	PTB domain-containing engulfment adapter protein 1-like.	PTB domain-containing engulfment adapter protein 1-like isoform X1.	0.817
ENSSGRP00000066801	LOC107584160	ENSSGRP00000066801	ENSSGRP00000028546	PTB domain-containing engulfment adapter protein 1-like.	PTB domain-containing engulfment adapter protein 1 isoform X1.	0.817
ENSSGRP00000097515	ENSSGRP00000011197	ENSSGRP00000097515	ENSSGRP00000011197	annotation not available	annotation not available	0.767
LOC107549238	ENSSGRP00000011197	ENSSGRP00000076655	ENSSGRP00000011197	G patch domain-containing protein 4-like.	annotation not available	0.650
LOC107551611	ENSSGRP00000011197	ENSSGRP00000026931	ENSSGRP00000011197	Complement C1q subcomponent subunit B-like isoform X1.	annotation not available	0.761