STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011300Pentraxin fusion protein-like. (205 aa)    
Predicted Functional Partners:
ENSSGRP00000043887
annotation not available
   
 
 0.855
ENSSGRP00000073987
annotation not available
   
 
 0.855
LOC107561453
Haptoglobin-like.
    
 0.629
LOC107566714
Adiponectin-like.
      
 0.597
ENSSGRP00000008898
Uncharacterized protein LOC107578959.
     
 0.513
ENSSGRP00000042554
Uncharacterized protein LOC107598455.
     
 0.513
ENSSGRP00000006394
annotation not available
      
 0.493
LOC107582292
Lymphotoxin alpha (TNF superfamily, member 1).
      
 0.493
ENSSGRP00000026179
Leptin a.
      
 0.485
ENSSGRP00000069284
Leptin a.
      
 0.485
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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