Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011301LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like. (1547 aa)    
Predicted Functional Partners:
ENSSGRP00000032432
annotation not available
    
 0.616
Fancm
Fanconi anemia group M protein.
    
 0.616
ENSSGRP00000020939
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.593
ENSSGRP00000083488
WRN RecQ like helicase.
     
 0.542
ENSSGRP00000002981
MUS81 structure-specific endonuclease subunit.
    
 0.532
ENSSGRP00000092762
MUS81 structure-specific endonuclease subunit.
    
 0.532
LOC107594523
Probable ATP-dependent RNA helicase DDX20.
   
 0.495
ENSSGRP00000096963
Probable ATP-dependent RNA helicase DDX20.
   
 0.495
LOC107553259
UBX domain-containing protein 7-like.
     
  0.493
LOC107563300
UBX domain-containing protein 7-like isoform X1.
     
  0.493
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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