STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011308Si:ch211-248l17.3. (622 aa)    
Predicted Functional Partners:
TMEM43
Transmembrane protein 43.
      
 0.638
ENSSGRP00000035978
Uncharacterized protein C7orf72-like.
      
 0.634
ENSSGRP00000043047
Meteorin-like.
      
 0.629
LOC107561897
Ribosomal RNA processing protein 36 homolog.
      
 0.624
ENSSGRP00000046950
Ribosomal RNA processing 36.
      
 0.624
LOC107584421
Kelch repeat and BTB domain-containing protein 12.
      
 0.623
LOC107568198
Kelch repeat and BTB domain-containing protein 12-like.
      
 0.623
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3.
   
  
 0.620
KCNG3-2
Potassium voltage-gated channel subfamily G member 3-like isoform X1.
   
  
 0.620
ENSSGRP00000012595
Protein FAM179B-like isoform X1.
      
 0.609
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.