Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587817Protein disulfide-isomerase A3-like. (501 aa)    
Predicted Functional Partners:
ENSSGRP00000005666
Calreticulin-like.
   
 0.971
LOC107548191
Calreticulin-like.
   
 0.971
LOC107552714
Calreticulin-like.
   
 0.955
LOC107561598
Calreticulin-like isoform X1.
   
 0.955
ENSSGRP00000081943
Calreticulin-like.
   
 0.955
LOC107549384
Calreticulin-like.
   
 0.955
LOC107549125
Protein disulfide-isomerase A6-like.
   
 0.954
LOC107601540
Protein disulfide-isomerase A6-like.
   
 0.954
ENSSGRP00000106973
ATP-binding cassette, subfamily B (MDR/TAP), member 2.
   
  0.935
ENSSGRP00000011056
TAP binding protein (tapasin).
    
 0.926
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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