Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011326Intraflagellar transport protein 140 homolog. (697 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
  
 0.999
IFT43
Intraflagellar transport protein 43 homolog.
    
 0.997
ENSSGRP00000035110
annotation not available
   
 0.996
wdr35
WD repeat-containing protein 35.
   
 0.996
ENSSGRP00000067953
annotation not available
  
 0.996
LOC107591558
WD repeat-containing protein 19-like isoform X1.
   
 0.996
ENSSGRP00000015647
Tetratricopeptide repeat protein 21B-like.
  
 0.995
ENSSGRP00000077591
Tetratricopeptide repeat protein 21B-like.
  
 0.995
ift52
Intraflagellar transport protein 52 homolog.
  
 0.987
ift172
Intraflagellar transport protein 172 homolog.
   
 0.984
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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