Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000011349Uncharacterized protein C7orf50 homolog. (192 aa)    
Predicted Functional Partners:
ddx24
ATP-dependent RNA helicase DDX24 isoform X1.
   
 
 0.898
ddx56
Probable ATP-dependent RNA helicase DDX56.
   
   0.896
ENSSGRP00000078700
Dyskeratosis congenita 1, dyskerin.
   
   0.882
LOC107581884
H/ACA ribonucleoprotein complex subunit 4-like.
   
   0.882
ENSSGRP00000075557
CCAAT enhancer binding protein zeta.
   
 
 0.873
LOC107590037
H/ACA ribonucleoprotein complex subunit 2-like protein.
   
   0.866
LOC107557075
H/ACA ribonucleoprotein complex subunit 2-like protein.
   
   0.866
LOC107566970
Protein MAK16 homolog.
   
  
 0.849
MAK16
Protein MAK16 homolog.
   
  
 0.849
ENSSGRP00000044344
RRP15-like protein isoform X1.
   
 
 0.830
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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