Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107600340Chromatin licensing and DNA replication factor 1. (677 aa)    
Predicted Functional Partners:
ENSSGRP00000007487
Cell division control protein 6 homolog.
   
 0.998
ENSSGRP00000062138
Cell division cycle 6 homolog (S. cerevisiae).
   
 0.997
LOC107564569
Origin recognition complex subunit 2-like.
   
 0.995
LOC107551039
Origin recognition complex subunit 1-like isoform X1.
   
 0.994
gmnn
Geminin isoform X1.
   
 0.994
ENSSGRP00000044520
Origin recognition complex, subunit 1.
   
 0.994
LOC107555567
Geminin-like isoform X1.
   
 0.994
mcm6
DNA replication licensing factor MCM6.
   
 0.991
ENSSGRP00000031827
Minichromosome maintenance complex component 6.
   
 0.991
ENSSGRP00000017833
annotation not available
   
 0.990
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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