Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011358LOW QUALITY PROTEIN: roundabout homolog 2-like. (1462 aa)    
Predicted Functional Partners:
ENSSGRP00000029922
Slit homolog 1 protein-like.
   
 0.886
ENSSGRP00000083563
Slit homolog 1 protein-like.
   
 0.886
ENSSGRP00000017864
Slit homolog 1b (Drosophila).
   
 0.885
ENSSGRP00000042530
Slit homolog 1b (Drosophila).
   
 0.885
ENSSGRP00000029028
Slit homolog 2 (Drosophila).
   
 0.871
SLIT2
Slit homolog 2 protein.
   
 0.871
ENSSGRP00000040623
Slit homolog 3 (Drosophila).
   
 0.831
ENSSGRP00000041386
Slit homolog 3 (Drosophila).
   
 0.831
ENSSGRP00000060870
annotation not available
   
 0.831
ENSSGRP00000027563
Roundabout homolog 2-like isoform X1.
    
 0.789
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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