Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107570607Striatin-interacting protein 1 homolog isoform X1. (825 aa)    
Predicted Functional Partners:
ENSSGRP00000105484
MOB-like protein phocein.
    
 
 0.934
Strn
Striatin 1/3/4.
   
 
 0.926
ENSSGRP00000067035
Striatin, calmodulin binding protein.
   
 
 0.926
LOC107582353
Striatin-3-like.
   
 
 0.884
LOC107590905
Striatin-3-like.
   
 
 0.884
ENSSGRP00000023781
Sarcolemma associated protein a.
    
 
 0.873
ENSSGRP00000106585
Sarcolemma associated protein a.
    
 
 0.873
LOC107591755
CTTNBP2 N-terminal-like protein.
    
 
 0.850
LOC107562782
CTTNBP2 N-terminal-like protein.
    
 
 0.850
rnf8
E3 ubiquitin-protein ligase RNF8 isoform X1.
    
 
 0.840
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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