Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011374Galactosamine (N-acetyl)-6-sulfatase. (474 aa)    
Predicted Functional Partners:
glb1
Beta-galactosidase.
   
 0.958
ENSSGRP00000011251
annotation not available
  
 0.929
ENSSGRP00000003212
annotation not available
   
 0.898
ENSSGRP00000064933
Beta-galactosidase-like.
   
 0.898
LOC107596522
Beta-galactosidase-like.
   
 0.898
ENSSGRP00000042075
Arylsulfatase A-like.
   
 0.861
LOC107599918
Arylsulfatase A-like.
   
 0.861
ENSSGRP00000044808
Sulfatase modifying factor 1.
  
 0.853
LOC107585117
Sulfatase-modifying factor 1-like isoform X1.
  
 0.853
LOC107572256
Alpha-L-iduronidase-like.
   
 0.809
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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