STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107600366Trafficking protein particle complex subunit 2-like protein. (139 aa)    
Predicted Functional Partners:
TRAPPC2B
Trafficking protein particle complex subunit 2.
    
 0.999
LOC107573932
Trafficking protein particle complex subunit 1-like.
   
 0.997
TRAPPC1
Trafficking protein particle complex subunit 1.
   
 0.997
trappc10
Trafficking protein particle complex subunit 10.
    
 0.996
ENSSGRP00000051956
Trafficking protein particle complex subunit 10-like.
    
 0.996
TRAPPC3
Trafficking protein particle complex subunit 3.
    
 0.996
LOC107564495
Trafficking protein particle complex subunit 3.
    
 0.996
ENSSGRP00000060911
Trafficking protein particle complex subunit 4-like.
   
 0.992
LOC107561742
Trafficking protein particle complex subunit 4 isoform X1.
   
 0.992
LOC107559294
Trafficking protein particle complex subunit 11-like.
    
 0.988
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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