Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107551585Circadian locomoter output cycles protein kaput-like. (787 aa)    
Predicted Functional Partners:
ENSSGRP00000004148
annotation not available
    
 0.876
LOC107553967
Class E basic helix-loop-helix protein 41-like.
    
 0.876
LOC107583813
Class E basic helix-loop-helix protein 41-like.
    
 0.876
LOC107585045
Nuclear receptor subfamily 1 group D member 1-like isoform X1.
    
 0.876
ENSSGRP00000099267
Nuclear receptor subfamily 1 group D member 1-like isoform X1.
    
 0.876
LOC107577974
Class E basic helix-loop-helix protein 40-like.
    
 0.870
LOC107573081
Class E basic helix-loop-helix protein 40-like.
    
 0.870
LOC107584701
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
   
 0.852
ENSSGRP00000056673
Aryl hydrocarbon receptor nuclear translocator-like 1b.
   
 0.852
LOC107583820
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
   
 0.852
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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