STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107551585Circadian locomoter output cycles protein kaput-like. (787 aa)    
Predicted Functional Partners:
LOC107584701
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
   
0.839
ENSSGRP00000056673
Aryl hydrocarbon receptor nuclear translocator-like 1b.
   
0.839
LOC107583820
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
   
0.839
LOC107572924
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.839
ENSSGRP00000102301
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
0.839
ENSSGRP00000032330
Neuronal PAS domain protein 4 like.
    
0.726
LOC107565719
Neuronal PAS domain-containing protein 4.
    
0.726
LOC107548203
Neuronal PAS domain-containing protein 4-like.
    
 0.726
LOC107561020
Neuronal PAS domain-containing protein 4-like.
    
0.726
ENSSGRP00000104356
Neuronal PAS domain-containing protein 4-like.
    
 0.726
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.