Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011404Rap guanine nucleotide exchange factor (GEF) 5b. (271 aa)    
Predicted Functional Partners:
ENSSGRP00000068033
annotation not available
   
 0.923
ENSSGRP00000072118
annotation not available
   
 0.923
RIMS2
Regulating synaptic membrane exocytosis protein 2-like.
   
 0.923
RIMS2-2
Regulating synaptic membrane exocytosis protein 2-like.
   
 0.923
ENSSGRP00000099252
Rap guanine nucleotide exchange factor (GEF)-like 1.
  
 
 
 0.798
LOC107600440
Ras-related protein M-Ras.
    
 0.761
LOC107587007
Ras-related protein M-Ras-like.
    
 0.761
LOC107593037
Ras-related protein M-Ras-like.
    
 0.761
LOC107551943
Ras-related protein M-Ras-like isoform X1.
    
 0.761
LOC107594522
Ras-related protein Rap-1A.
    
 0.747
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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