STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011404Rap guanine nucleotide exchange factor (GEF) 5b. (271 aa)    
Predicted Functional Partners:
ENSSGRP00000099252
Rap guanine nucleotide exchange factor (GEF)-like 1.
  
 
 
 0.744
LOC107585050
Rap guanine nucleotide exchange factor-like 1.
    
 
 0.673
LOC107599366
Rap guanine nucleotide exchange factor 1-like.
    
 
 0.620
ENSSGRP00000093131
Rap guanine nucleotide exchange factor 1-like.
    
 
 0.620
ENSSGRP00000109271
Nance-Horan syndrome protein and NHS-like proteins.
      
 0.519
ENSSGRP00000109948
Nance-Horan syndrome protein and NHS-like proteins.
      
 0.519
commd6
COMM domain-containing protein 6.
      
 0.499
ENSSGRP00000029217
Brefeldin A-inhibited guanine nucleotide-exchange protein 3-like.
      
 0.487
LOC107568730
Brefeldin A-inhibited guanine nucleotide-exchange protein 3-like.
      
 0.487
ENSSGRP00000068033
annotation not available
    
 
 0.460
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.