STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011417LOW QUALITY PROTEIN: multidrug resistance protein 1-like. (1263 aa)    
Predicted Functional Partners:
LOC107549227
ATP-binding cassette, subfamily B (MDR/TAP), member 1.
  
  
 
0.902
ENSSGRP00000100399
Hemopexin-like.
   
  
 0.712
katnal2
Katanin p60 ATPase-containing subunit A-like 2.
  
 0.645
ENSSGRP00000057681
LOW QUALITY PROTEIN: katanin p60 ATPase-containing subunit A-like 2.
  
 0.645
tiprl
Type 2A phosphatase activator TIP41.
  
 0.604
LOC107595840
Hemopexin.
   
  
 0.577
ENSSGRP00000026767
annotation not available
    
0.566
abcb7
ATP-binding cassette sub-family B member 7, mitochondrial.
    
0.566
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.560
prkn
E3 ubiquitin-protein ligase parkin.
     
 0.560
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.