Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bloc1s3Biogenesis of lysosome-related organelles complex 1 subunit 3. (212 aa)    
Predicted Functional Partners:
Bloc1s6
Biogenesis of lysosome-related organelles complex 1 subunit 6.
    
 0.999
ENSSGRP00000015617
Dystrobrevin binding protein 1b.
    
 0.998
LOC107573571
Biogenesis of lysosome-related organelles complex 1 subunit 1.
    
 0.998
LOC107586997
Biogenesis of lysosome-related organelles complex 1 subunit 1-like.
    
 0.998
ENSSGRP00000084606
Dystrobrevin binding protein 1b.
    
 0.998
ENSSGRP00000039541
Biogenesis of lysosomal organelles complex-1, subunit 5, muted.
    
 0.985
LOC107550075
SNARE-associated protein Snapin-like.
    
 0.985
LOC107572672
Biogenesis of lysosome-related organelles complex 1 subunit 5-like.
    
 0.985
LOC107563919
SNARE-associated protein Snapin-like.
    
 0.985
LOC107581516
Biogenesis of lysosome-related organelles complex 1 subunit 2-like isoform X1.
    
 0.977
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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