Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
atrnl1Attractin-like protein 1. (1367 aa)    
Predicted Functional Partners:
ENSSGRP00000106720
Smoothened homolog.
     
 0.792
ENSSGRP00000037094
E3 ubiquitin-protein ligase MGRN1-like.
   
 
 0.788
mgrn1
E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.788
ENSSGRP00000098398
TBC1 domain family member 31-like.
    
 0.640
LOC107584113
Probable E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.632
LOC107554032
Probable E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.632
ENSSGRP00000051823
Cytosolic phospholipase A2.
     
  0.609
LOC107599091
Cytosolic phospholipase A2-like.
     
  0.609
ENSSGRP00000084148
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
     
  0.609
ENSSGRP00000107496
Cytosolic phospholipase A2-like.
     
  0.609
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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