STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atrnl1Attractin-like protein 1. (1367 aa)    
Predicted Functional Partners:
ENSSGRP00000085366
Methyltransferase-like protein 16.
    
 0.564
LOC107581938
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 0.564
ENSSGRP00000098398
TBC1 domain family member 31-like.
    
 0.564
LOC107592620
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 0.564
LOC107587218
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 0.564
ENSSGRP00000037094
E3 ubiquitin-protein ligase MGRN1-like.
   
 
 0.561
mgrn1
E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.561
LOC107584113
Probable E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.500
LOC107554032
Probable E3 ubiquitin-protein ligase MGRN1 isoform X1.
   
 
 0.500
ENSSGRP00000022291
annotation not available
   
 
 0.443
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.