STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107585142Ubiquitin-protein ligase E3A-like. (912 aa)    
Predicted Functional Partners:
LOC107599945
Cellular tumor antigen p53.
    
 
 0.939
LOC107592291
Cellular tumor antigen p53-like.
    
 
 0.939
LOC107582722
Ubiquitin-protein ligase E3 A.
  
  
 
0.900
LOC107596690
26S proteasome non-ATPase regulatory subunit 4-like.
    
 
 0.862
LOC107599594
26S proteasome non-ATPase regulatory subunit 4-like.
    
 
 0.862
ENSSGRP00000066180
Proteasome 26S subunit, non-ATPase 4b.
    
 
 0.862
LOC107565570
26S proteasome non-ATPase regulatory subunit 4-like.
    
 
 0.862
LOC107548991
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.853
LOC107599129
Ubiquitin-conjugating enzyme E2 L3.
   
 0.853
LOC107602229
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.853
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.