Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011472Transcription activation suppressor a. (1219 aa)    
Predicted Functional Partners:
mphosph8
M-phase phosphoprotein 8 isoform X1.
    
 0.930
LOC107569068
M-phase phosphoprotein 8-like isoform X1.
    
 0.930
morc2
MORC family CW-type zinc finger protein 2 isoform X1.
     
 0.814
LOC107561132
MORC family CW-type zinc finger protein 2A-like.
     
 0.814
atf7ip
Activating transcription factor 7-interacting protein 1 isoform X1.
   
 
 0.782
ENSSGRP00000079384
Activating transcription factor 7-interacting protein 1-like.
   
 
 0.782
LOC107582057
[histone H3]-lysine9 N-trimethyltransferase SETDB1.
   
 0.721
ENSSGRP00000018720
[histone H3]-lysine9 N-trimethyltransferase SETDB2.
   
 0.721
LOC107573682
Histone-lysine N-methyltransferase SETDB1-B isoform X1.
   
 0.721
ENSSGRP00000059322
SET domain bifurcated histone lysine methyltransferase 1a.
   
 0.721
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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