STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107548474Histone H3.3-like. (136 aa)    
Predicted Functional Partners:
LOC107554308
Lysine-specific demethylase 6B-like isoform X1.
   
 0.913
ENSSGRP00000053783
Lysine (K)-specific demethylase 6A, like.
   
 0.913
LOC107556731
Lysine-specific demethylase 6A-like.
   
 0.913
kdm6b
Lysine-specific demethylase 6B.
   
 0.913
ENSSGRP00000092813
Lysine (K)-specific demethylase 6A.
   
 0.913
LOC107586158
Lysine-specific demethylase 6B-like isoform X1.
   
 0.913
kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.913
ENSSGRP00000111311
Lysine-specific demethylase 6B-like.
   
 0.913
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.890
ENSSGRP00000011618
AT-rich interactive domain-containing protein 4A-like.
   
 0.871
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.