STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107555486UPF0488 protein C8orf33 homolog. (225 aa)    
Predicted Functional Partners:
LOC107566991
Beta-lactamase-like protein 2 isoform X1.
      
 0.611
LOC107602616
Beta-lactamase-like protein 2 isoform X1.
      
 0.611
LOC107589434
Protein HGH1 homolog.
      
 0.606
LOC107559713
Protein HGH1 homolog.
      
 0.606
ENSSGRP00000004849
Proline-rich protein PRCC-like.
      
 0.503
LOC107589427
Proline-rich protein PRCC-like.
      
 0.503
ENSSGRP00000040168
Multifunctional methyltransferase subunit TRM112-like protein.
   
  
 0.496
LOC107589144
Multifunctional methyltransferase subunit TRM112-like protein.
   
  
 0.496
ENSSGRP00000007873
DNA replication and sister chromatid cohesion 1.
      
 0.493
ENSSGRP00000024369
Sister chromatid cohesion protein DCC1.
      
 0.493
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.