Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4BCharged multivesicular body protein 4c-like. (223 aa)    
Predicted Functional Partners:
LOC107559457
Charged multivesicular body protein 7-like.
    
 0.978
Vps25
Vacuolar protein-sorting-associated protein 25.
    
 0.976
LOC107552765
Charged multivesicular body protein 2A.
   
 0.973
LOC107582752
Charged multivesicular body protein 2a-like.
   
 0.973
LOC107586824
Charged multivesicular body protein 3.
   
 0.970
LOC107561686
Charged multivesicular body protein 3-like.
   
 0.970
LOC107591619
Programmed cell death 6-interacting protein-like isoform X1.
   
 0.965
LOC107593555
Programmed cell death 6-interacting protein-like isoform X1.
   
 0.965
LOC107554070
ESCRT-II complex subunit VPS22.
    
 0.963
LOC107584075
Vacuolar-sorting protein SNF8-like.
    
 0.963
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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