STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4BCharged multivesicular body protein 4c-like. (223 aa)    
Predicted Functional Partners:
LOC107591619
Programmed cell death 6-interacting protein-like isoform X1.
   
 0.988
LOC107593555
Programmed cell death 6-interacting protein-like isoform X1.
   
 0.988
LOC107559457
Charged multivesicular body protein 7-like.
    
 0.986
LOC107586824
Charged multivesicular body protein 3.
   
 0.960
LOC107561686
Charged multivesicular body protein 3-like.
   
 0.960
LOC107552765
Charged multivesicular body protein 2A.
   
 0.953
LOC107582752
Charged multivesicular body protein 2a-like.
   
 0.953
Vps25
Vacuolar protein-sorting-associated protein 25.
    
 0.930
ENSSGRP00000011152
Tyrosine-protein phosphatase non-receptor type 23-like.
   
 0.915
LOC107602386
Tyrosine-protein phosphatase non-receptor type 23-like isoform X1.
   
 0.915
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.