Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011515Rhomboid-related protein 1-like. (286 aa)    
Predicted Functional Partners:
ENSSGRP00000102142
Rho GTPase-activating protein 6-like.
      
 0.745
ENSSGRP00000071873
Conserved oligomeric Golgi complex subunit 3-like.
      
 0.601
ENSSGRP00000102051
Conserved oligomeric Golgi complex subunit 3-like.
      
 0.601
ENSSGRP00000071867
Rho GTPase-activating protein 6-like isoform X1.
      
 0.600
ENSSGRP00000071868
annotation not available
      
 0.600
anks3
Ankyrin repeat and SAM domain-containing protein 3.
      
 0.588
ENSSGRP00000043171
annotation not available
      
 0.588
ENSSGRP00000011510
WD repeat-containing protein 24-like.
      
 0.585
wdr24
WD repeat-containing protein 24 isoform X1.
      
 0.585
ENSSGRP00000109273
Rho GTPase activating protein 36.
      
 0.580
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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